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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7481276 chr11:48548924 C/T FOLH1B chr11:89372395-89431886:+ 0.43 6.24 9.49E-10 Box Plot
THCA rs74822660 chr1:144579934 T/C LOC728855 chr1:149576161-149672983:+ 0.33 6.74 4.58E-11 Box Plot
THCA rs74822660 chr1:144579934 T/C NBPF14 chr1:148003642-148025863:- 0.57 15.09 2.28E-42 Box Plot
THCA rs7482690 chr11:49648814 C/T FOLH1B chr11:89372395-89431886:+ -0.35 -6.34 5.48E-10 Box Plot
THCA rs7483123 chr11:48599092 A/T FOLH1B chr11:89372395-89431886:+ 0.42 6.19 1.26E-9 Box Plot
THCA rs7483180 chr11:48599103 G/A FOLH1B chr11:89372395-89431886:+ 0.42 6.21 1.14E-9 Box Plot
THCA rs7483361 chr11:48593786 G/A FOLH1B chr11:89372395-89431886:+ 0.42 6.19 1.26E-9 Box Plot
THCA rs7483369 chr11:48593963 C/G FOLH1B chr11:89372395-89431886:+ 0.42 6.27 8.18E-10 Box Plot
THCA rs74851687 chr11:48951750 A/C FOLH1B chr11:89372395-89431886:+ 0.45 6.51 1.87E-10 Box Plot
THCA rs74865196 chr5:49674996 T/C LOC647121 chr1:121260910-121313686:+ 0.37 7.92 1.67E-14 Box Plot
THCA rs74930527 chr5:45744525 G/C LOC647121 chr1:121260910-121313686:+ 0.35 7.57 1.94E-13 Box Plot
THCA rs74967508 chr6:151768308 G/A NEK5 chr13:52607747-52703214:- 0.65 7.6 1.62E-13 Box Plot
THCA rs74968941 chr6:116669096 TAAAC/T ECSIT chr19:11616731-11639989:- -0.23 -6.13 1.83E-9 Box Plot
THCA rs74992349 chr11:49019252 G/A FOLH1B chr11:89372395-89431886:+ 0.45 6.41 3.51E-10 Box Plot
THCA rs7499667 chr16:20448520 T/C ZMYND12 chr1:42896000-42921938:- 0.26 5.94 5.59E-9 Box Plot